AugmentClaude
BackendDevOps

GitNexus CLI

By abhigyanpatwari· abhigyanpatwari/GitNexus· 0

Analyze, index, and generate wikis for your codebase via command line.

Installation

  1. Make sure Claude is on your device and in your terminal.

    Skills load from ~/.claude/skills/ when Claude Code starts up — so you need it on your machine first. If you don't have it yet, install it once with the command below, then run claude in any terminal to verify.

    One-time setup
    npm i -g @anthropic-ai/claude-code

    Already have it? Skip ahead.

  2. Paste into Claude Code or into your terminal.
    Install
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    This copies the whole skill folder into ~/.claude/skills/gitnexus-cli-abhigyanpatwari/ — the SKILL.md plus any scripts, reference docs, or templates the skill ships with. Safe default: works for every skill.

    Faster alternative (instruction-only skills)

    Skips the clone and grabs only the SKILL.md file. Don't use this if the skill ships Python scripts, reference markdowns, or asset templates — they won't be downloaded and the skill will fail when it tries to load them.

    Quick install (SKILL.md only)
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  3. Restart Claude Code.

    Quit and reopen Claude Code (or any other agent that loads from ~/.claude/skills/). New skills are picked up on startup.

  4. Just ask Claude.

    Skills auto-activate when your request matches the skill's description — no slash command needed. Trigger phrases live in the skill's own frontmatter; you can read them in the “What this skill does” section above.

Prefer to read the source first? Open on GitHub.

When Claude uses it

Use when the user needs to run GitNexus CLI commands like analyze/index a repo, check status, clean the index, generate a wiki, or list indexed repos. Examples: "Index this repo", "Reanalyze the codebase", "Generate a wiki"

What this skill does

GitNexus CLI Commands

Commands below use node .gitnexus/run.cjs <command> — the project-local runner gitnexus analyze drops next to the index. It auto-selects an available runner at call time (global gitnexus, else pnpm dlx, else npx), so no package-manager assumption and no global install is required.

Not analyzed yet, or node .gitnexus/run.cjs reports Cannot find module (the gitignored runner is absent — e.g. a fresh clone or git clean)? (Re)generate it with npx gitnexus analyze from the project root. On npm 11.x, if npx crashes during install (node.target is null), install once with npm i -g gitnexus (then gitnexus analyze) or use pnpm --allow-build=@ladybugdb/core --allow-build=gitnexus --allow-build=tree-sitter dlx gitnexus@latest analyze. See #1939.

Commands

analyze — Build or refresh the index

node .gitnexus/run.cjs analyze

Run from the project root. This parses all source files, builds the knowledge graph, writes it to .gitnexus/, and generates CLAUDE.md / AGENTS.md context files.

FlagEffect
--forceForce full re-index even if up to date
--embeddingsEnable embedding generation for semantic search (off by default)
--drop-embeddingsDrop existing embeddings on rebuild. By default, an analyze without --embeddings preserves them.

When to run: First time in a project, after major code changes, or when gitnexus://repo/{name}/context reports the index is stale. In Claude Code, a PostToolUse hook detects staleness after git commit and git merge and notifies the agent to run analyze — the hook does not run analyze itself, to avoid blocking the agent for up to 120s and risking KuzuDB corruption on timeout.

status — Check index freshness

node .gitnexus/run.cjs status

Shows whether the current repo has a GitNexus index, when it was last updated, and symbol/relationship counts. Use this to check if re-indexing is needed.

clean — Delete the index

node .gitnexus/run.cjs clean

Deletes the .gitnexus/ directory and unregisters the repo from the global registry. Use before re-indexing if the index is corrupt or after removing GitNexus from a project.

FlagEffect
--forceSkip confirmation prompt
--allClean all indexed repos, not just the current one

wiki — Generate documentation from the graph

node .gitnexus/run.cjs wiki

Generates repository documentation from the knowledge graph using an LLM. Requires an API key (saved to ~/.gitnexus/config.json on first use).

FlagEffect
--forceForce full regeneration
--model <model>LLM model (default: minimax/minimax-m2.5)
--base-url <url>LLM API base URL
--api-key <key>LLM API key
--concurrency <n>Parallel LLM calls (default: 3)
--gistPublish wiki as a public GitHub Gist

list — Show all indexed repos

node .gitnexus/run.cjs list

Lists all repositories registered in ~/.gitnexus/registry.json. The MCP list_repos tool provides the same information.

After Indexing

  1. Read gitnexus://repo/{name}/context to verify the index loaded
  2. Use the other GitNexus skills (exploring, debugging, impact-analysis, refactoring) for your task

Troubleshooting

  • "Not inside a git repository": Run from a directory inside a git repo
  • Index is stale after re-analyzing: Restart Claude Code to reload the MCP server
  • Embeddings slow: Omit --embeddings (it's off by default) or set OPENAI_API_KEY for faster API-based embedding

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